Properties of hydrated excess protons near phospholipid bilayers

Yamashita T, Voth GA. Properties of hydrated excess protons near phospholipid bilayers J Phys Chem B. 2010 Jan 14;114(1):592-603. doi: 10.1021/jp908768c.

Visual observation of avidin-biotin affinity by fluorescent G4.5 poly(amidoamine) dendrimer.

Saravanan G, Daigo K, Imae T, Hamakubo T. Visual observation of avidin-biotin affinity by fluorescent G4.5 poly(amidoamine) dendrimer. Colloids Surf B Biointerfaces. 2011 Mar;83(1):58-60. doi: 10.1016/j.colsurfb.2010.10.043. Epub 2010 Nov 2.

Activation of mitogen-activated protein kinases by lysophosphatidylcholine-induced mitochondrial reactive oxygen species generation in endothelial cells.

Daigo K, Kawamura T, Ohta Y, Ohashi R, Katayose S, Tanaka T, Aburatani H, Naito M, Kodama T, Ihara S, Hamakubo T. Activation of mitogen-activated protein kinases by lysophosphatidylcholine-induced mitochondrial reactive oxygen species generation in endothelial cells. J Biol Chem. 2011 Jan 7;286(1):674-86. doi: 10.1074/jbc.M110.154732. Epub 2010 Nov 3. Erratum in: J Biol Chem. 2013 Aug 16;288(33):24161.

Testis-specific protein on Y chromosome (TSPY) represses the activity of the androgen receptor in androgen-dependent testicular germ-cell tumors.

Akimoto C, Ueda T, Inoue K, Yamaoka I, Sakari M, Obara W, Fujioka T, Nagahara A, Nonomura N, Tsutsumi S, Aburatani H, Miki T, Matsumoto T, Kitagawa H, Kato S. Testis-specific protein on Y chromosome (TSPY) represses the activity of the androgen receptor in androgen-dependent testicular germ-cell tumors. Proc Natl Acad Sci U S A. 2010 Nov 16;107(46):19891-6. doi: 10.1073/pnas.1010307107. Epub 2010 Nov 1. Retraction in: Akimoto C, Ueda T, Inoue K, Yamaoka I, Sakari M, Obara W, Fujioka T, Nagahara A, Nonomura N, Tsutsumi S, Aburatani H, Miki T, Matsumoto T, Kitagawa H, Kato S. Proc Natl Acad Sci U S A. 2014 Feb 11;111(6):2398.

Establishment of mice expressing EGFP in the placode-derived inner ear sensory cell lineage and FACS-array analysis focused on the regional specificity of the otocyst.

Fujimoto C, Ozeki H, Uchijima Y, Suzukawa K, Mitani A, Fukuhara S, Nishiyama K, Kurihara Y, Kondo K, Aburatani H, Kaga K, Yamasoba T, Kurihara H. Establishment of mice expressing EGFP in the placode-derived inner ear sensory cell lineage and FACS-array analysis focused on the regional specificity of the otocyst. J Comp Neurol. 2010 Dec 1;518(23):4702-22. doi: 10.1002/cne.22468.

Genome-wide profiling of the core clock protein BMAL1 targets reveals a strict relationship with metabolism.

Hatanaka F, Matsubara C, Myung J, Yoritaka T, Kamimura N, Tsutsumi S, Kanai A, Suzuki Y, Sassone-Corsi P, Aburatani H, Sugano S, Takumi T. Genome-wide profiling of the core clock protein BMAL1 targets reveals a strict relationship with metabolism. Mol Cell Biol. 2010 Dec;30(24):5636-48. doi: 10.1128/MCB.00781-10. Epub 2010 Oct 11.

Co-activation of epidermal growth factor receptor and c-MET defines a distinct subset of lung adenocarcinomas.

Matsubara D, Ishikawa S, Sachiko O, Aburatani H, Fukayama M, Niki T. Co-activation of epidermal growth factor receptor and c-MET defines a distinct subset of lung adenocarcinomas. Am J Pathol. 2010 Nov;177(5):2191-204. doi: 10.2353/ajpath.2010.100217. Epub 2010 Oct 7.

Vascular endothelial growth factor receptor-1 signaling promotes mobilization of macrophage lineage cells from bone marrow and stimulates solid tumor growth.

Muramatsu M, Yamamoto S, Osawa T, Shibuya M. Vascular endothelial growth factor receptor-1 signaling promotes mobilization of macrophage lineage cells from bone marrow and stimulates solid tumor growth. Cancer Res. 2010 Oct 15;70(20):8211-21. doi: 10.1158/0008-5472.CAN-10-0202. Epub 2010 Oct 5.

Integration of cap analysis of gene expression and chromatin immunoprecipitation analysis on array reveals genome-wide androgen receptor signaling in prostate cancer cells.

Takayama K, Tsutsumi S, Katayama S, Okayama T, Horie-Inoue K, Ikeda K, Urano T, Kawazu C, Hasegawa A, Ikeo K, Gojyobori T, Ouchi Y, Hayashizaki Y, Aburatani H, Inoue S. Integration of cap analysis of gene expression and chromatin immunoprecipitation analysis on array reveals genome-wide androgen receptor signaling in prostate cancer cells. Oncogene. 2011 Feb 3;30(5):619-30. doi: 10.1038/onc.2010.436. Epub 2010 Oct 4.

Minichromosome maintenance (MCM) protein 4 as a marker for proliferation and its clinical and clinicopathological significance in non-small cell lung cancer.

Kikuchi J, Kinoshita I, Shimizu Y, Kikuchi E, Takeda K, Aburatani H, Oizumi S, Konishi J, Kaga K, Matsuno Y, Birrer MJ, Nishimura M, Dosaka-Akita H. Minichromosome maintenance (MCM) protein 4 as a marker for proliferation and its clinical and clinicopathological significance in non-small cell lung cancer. Lung Cancer. 2011 May;72(2):229-37. doi: 10.1016/j.lungcan.2010.08.020. Epub 2010 Sep 29.

Thrombin-induced autoinhibitory factor, Down syndrome critical region-1, attenuates NFAT-dependent vascular cell adhesion molecule-1 expression and inflammation in the endothelium.

Nishikawa K, Nakashima T, Takeda S, Isogai M, Hamada M, Kimura A, Kodama T, Yamaguchi A, Owen MJ, Takahashi S, Takayanagi H. Thrombin-induced autoinhibitory factor, Down syndrome critical region-1, attenuates NFAT-dependent vascular cell adhesion molecule-1 expression and inflammation in the endothelium. J Clin Invest. 2010 Oct;120(10):3455-65. doi: 10.1172/JCI42528. Epub 2010 Sep 27.

The G protein-coupled receptor T-cell death-associated gene 8 (TDAG8) facilitates tumor development by serving as an extracellular pH sensor.

Ihara Y, Kihara Y, Hamano F, Yanagida K, Morishita Y, Kunita A, Yamori T, Fukayama M, Aburatani H, Shimizu T, Ishii S. The G protein-coupled receptor T-cell death-associated gene 8 (TDAG8) facilitates tumor development by serving as an extracellular pH sensor. Proc Natl Acad Sci U S A. 2010 Oct 5;107(40):17309-14. doi: 10.1073/pnas.1001165107. Epub 2010 Sep 20.

Proteomic analysis of laser-microdissected paraffin-embedded tissues: (1) Stage-related protein candidates upon non-metastatic lung adenocarcinoma.

Takeshi Kawamura*, Masaharu Nomura*, Hiromasa Tojo, Kiyonaga Fujii, Hiroko Hamasaki, Sayaka Mikami, Yasuhiko Bando, Harubumi Kato and Toshihide Nishimura (* equally contributed). Proteomic analysis of laser-microdissected paraffin-embedded tissues: (1) Stage-related protein candidates upon non-metastatic lung adenocarcinoma. J Proteomics. 2010 Apr 18;73(6):1089-99. Epub 2009 Nov 27. PMID: 19948256

Human ROBO1 Is Cleaved by Metalloproteinases and g-Secretase and Migrates to the Nucleus in Cancer Cells.

Motoaki Seki, Akira Watanabe, Satoshi Enomoto, Takeshi Kawamura, Hirotaka Ito, Tatsuhiko Kodama, Takao Hamakubo and Hiroyuki Aburatani Human ROBO1 Is Cleaved by Metalloproteinases and g-Secretase and Migrates to the Nucleus in Cancer Cells. FEBS letter. 2010 Jul 2;584(13):2909-15. Epub 2010 May 13. PMID: 20471383

A Clinician View of Proteomic Studies in the Light of the Experience in the Lung Cancer in Japanese Healthcare.

Kato H, Nishimura T, Hirano T, Nomura M, Tojo H, Fujii K, Kawamura T, Mikami S, Kihara M, Bando Y, Tsuboi M, Ikeda N, Varga GM. A Clinician View of Proteomic Studies in the Light of the Experience in the Lung Cancer in Japanese Healthcare. J Proteome Res. 2010 Dec 8. Epub 2011 Jan 7;10(1):51-7.

Molecular predictors of sensitivity to the MET inhibitor PHA665752 in lung carcinoma cells.

Matsubara D, Ishikawa S, Oguni S, Aburatani H, Fukayama M, Niki T. Molecular predictors of sensitivity to the MET inhibitor PHA665752 in lung carcinoma cells. J Thorac Oncol. 2010 Sep;5(9):1317-24. doi: 10.1097/JTO.0b013e3181e2a409.