Dimension reduction for extracting geometrical structure of multidimensional phase space: Application to fast energy exchange in the reaction O ( 1 D ) + N 2 O → NO + NO

Kawai S, Fujimura Y, Kajimoto O, Yamashita T, Li C-B, Komatsuzaki T, Toda M. Dimension reduction for extracting geometrical structure of multidimensional phase space: Application to fast energy exchange in the reaction O ( 1 D ) + N 2 O → NO + NO Phys. Rev. A 2007, 75, 022714 – Published 16 February DOI:https://doi.org/10.1103/PhysRevA.75.022714

Hydrogen-bond assisted enormous broadening of infrared spectra of phenol-water cationic cluster: An ab initio mixed quantum-classical study

Yamashita T, Takatsuka K. Hydrogen-bond assisted enormous broadening of infrared spectra of phenol-water cationic cluster: An ab initio mixed quantum-classical study J Chem Phys 2007, 126, 074304; doi: http://dx.doi.org/10.1063/1.2434778

Development of artificial restriction DNA cutter composed of Ce(Iv)/EDTA and PNA.

Yamamoto Y, Uehara A, Miura K, Watanabe A, Aburatani H, Komiyama M. Development of artificial restriction DNA cutter composed of Ce(Iv)/EDTA and PNA. Nucleosides Nucleotides Nucleic Acids. 2007;26(10-12):1265-8.

Lipopolysaccharide induced expression of pentraxin 3 in human neutrophils and monocyte-derived macrophages.

Imamura M, Kawasaki T, Savchenko AS, Ohashi R, Jiang S, Miyamoto K, Ito Y, Iwanari H, Sagara M, Tanaka T, Hamakubo T, Kodama T, Uchiyama M, Naito M. Lipopolysaccharide induced expression of pentraxin 3 in human neutrophils and monocyte-derived macrophages. Cell Immunol. 2007 Aug;248(2):86-94. Epub 2007 Nov 28.

Antisense activity of 2′,4′-BNA targeted to PPAR gamma in THP-1 and HCT116 cells.

Tachibana K, Katayama T, Ueda C, Sumitomo M, Tagami M, Ishimoto K, Yamasaki D, Tanaka T, Hamakubo T, Sakai J, Kodama T, Obika S, Imanishi T, Doi T. Antisense activity of 2′,4′-BNA targeted to PPAR gamma in THP-1 and HCT116 cells. Nucleic Acids Symp Ser (Oxf). 2007;(51):441-2.

Expression of HNF-4alpha (MODY1), HNF-1beta (MODY5), and HNF-1alpha (MODY3) proteins in the developing mouse pancreas.

Nammo T, Yamagata K, Tanaka T, Kodama T, Sladek FM, Fukui K, Katsube F, Sato Y, Miyagawa J, Shimomura I. Expression of HNF-4alpha (MODY1), HNF-1beta (MODY5), and HNF-1alpha (MODY3) proteins in the developing mouse pancreas. Gene Expr Patterns. 2008 Jan;8(2):96-106. Epub 2007 Oct 9.

Constitutive activation of c-Met is correlated with c-Met overexpression and dependent on cell-matrix adhesion in lung adenocarcinoma cell lines.

Nakamura Y, Matsubara D, Goto A, Ota S, Sachiko O, Ishikawa S, Aburatani H, Miyazawa K, Fukayama M, Niki T. Constitutive activation of c-Met is correlated with c-Met overexpression and dependent on cell-matrix adhesion in lung adenocarcinoma cell lines. Cancer Sci. 2008 Jan;99(1):14-22. Epub 2007 Oct 22.

Pitx2 prevents osteoblastic transdifferentiation of myoblasts by bone morphogenetic proteins.

Hayashi M, Maeda S, Aburatani H, Kitamura K, Miyoshi H, Miyazono K, Imamura T. Pitx2 prevents osteoblastic transdifferentiation of myoblasts by bone morphogenetic proteins. J Biol Chem. 2008 Jan 4;283(1):565-71. Epub 2007 Oct 20.

Transforming growth factor-beta promotes survival of mammary carcinoma cells through induction of antiapoptotic transcription factor DEC1.

Ehata S, Hanyu A, Hayashi M, Aburatani H, Kato Y, Fujime M, Saitoh M, Miyazawa K, Imamura T, Miyazono K. Transforming growth factor-beta promotes survival of mammary carcinoma cells through induction of antiapoptotic transcription factor DEC1. Cancer Res. 2007 Oct 15;67(20):9694-703.

Transcriptional activation by hypoxia and low-density lipoprotein loading in cultured vascular smooth muscle cells.

Sugiyama A, Wada Y, Izumi A, Kobayashi M, Kohro T, Patrick CR, Hamakubo T, Kodama T. Transcriptional activation by hypoxia and low-density lipoprotein loading in cultured vascular smooth muscle cells. J Atheroscler Thromb. 2007 Oct;14(5):226-34. Epub 2007 Oct 12.

Life style-related diseases of the digestive system: gene expression in nonalcoholic steatohepatitis patients and treatment strategies.

Yoneda M, Endo H, Nozaki Y, Tomimoto A, Fujisawa T, Fujita K, Yoneda K, Takahashi H, Saito S, Iwasaki T, Yamamoto S, Tsutsumi S, Aburatani H, Wada K, Hotta K, Nakajima A. Life style-related diseases of the digestive system: gene expression in nonalcoholic steatohepatitis patients and treatment strategies. J Pharmacol Sci. 2007 Oct;105(2):151-6. Epub 2007 Oct 6. Review.

Identification of Toll-like receptor 3 as a potential therapeutic target in clear cell renal cell carcinoma.

Morikawa T, Sugiyama A, Kume H, Ota S, Kashima T, Tomita K, Kitamura T, Kodama T, Fukayama M, Aburatani H. Identification of Toll-like receptor 3 as a potential therapeutic target in clear cell renal cell carcinoma. Clin Cancer Res. 2007 Oct 1;13(19):5703-9.

Parkin interacts with LIM Kinase 1 and reduces its cofilin-phosphorylation activity via ubiquitination.

Lim MK, Kawamura T, Ohsawa Y, Ohtsubo M, Asakawa S, Takayanagi A, Shimizu N. Parkin interacts with LIM Kinase 1 and reduces its cofilin-phosphorylation activity via ubiquitination. Exp Cell Res. 2007 Aug 1;313(13):2858-74. Epub 2007 Apr 20.PMID: 17512523

Personalized medicine and proteomics: lessons from non-small cell lung cancer.

Marko-Varga G, Ogiwara A, Nishimura T, Kawamura T, Fujii K, Kawakami T, Kyono Y, Tu HK, Anyoji H, Kanazawa M, Akimoto S, Hirano T, Tsuboi M, Nishio K, Hada S, Jiang H, Fukuoka M, Nakata K, Nishiwaki Y, Kunito H, Peers IS, Harbron CG, South MC, Higenbottam T, Nyberg F, Kudoh S, Kato H. Personalized medicine and proteomics: lessons from non-small cell lung cancer. J Proteome Res. 2007 Aug;6(8):2925-35. Epub 2007 Jul 17. PMID: 17636986

Alteration of cystatin C in the cerebrospinal fluid of multiple sclerosis.

Nakashima I, Fujinoki M, Fujihara K, Kawamura T, Nishimura T, Nakamura M, Itoyama Y. Alteration of cystatin C in the cerebrospinal fluid of multiple sclerosis. Ann Neurol. 2007 Aug;62(2):197-200; discussion 205. PMID: 16958112

[Bile acids and control of lipid metabolism].

Tanaka T, Sakai J, Kodama T. [Bile acids and control of lipid metabolism]. Nihon Rinsho. 2007 Jul 28;65 Suppl 7:557-63. Review. Japanese. No abstract available.

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